API Documentation

Pipelines (ephypype.pipelines):

create_pipeline_preproc_meeg(main_path[, ...])	Preprocessing pipeline.
create_pipeline_evoked(main_path[, ...])	Evoked pipeline.
create_pipeline_power(main_path, freq_bands)	Power pipeline.
create_pipeline_source_reconstruction(...[, ...])	Source reconstruction pipeline.
create_pipeline_evoked_inverse_solution(...)	Source reconstruction pipeline.
create_pipeline_time_series_to_spectral_connectivity(...)	Connectivity pipeline.

Nodes (ephypype.nodes):

LFComputation([from_file, resource_monitor, ...])	Compute the Lead Field matrix using MNE Python functions.
NoiseCovariance([from_file, ...])	Compute the noise covariance matrix.
InverseSolution([from_file, ...])	Compute the inverse solution on raw or epoch data.

CLI commands (ephypype.commands.neuropycon):

connectivity	Compute spectral connectivity
ds2fif	Convert CTF .ds raw data to .fif format
epoch	Epoch raw .fif resting state data
fif_ep_2_ts	Convert .fif epochs to npy timeseries
ica	Compute ica solution for raw fif file
multiscale	Compute multiscale entropy node
preproc	Filter and downsample data.
process_pipeline(nodes, ncpu, plugin, ...)	Create main workflow
psd	Compute power spectral density.

Utils (ephypype.nodes):

create_iterator(fields, field_values)	Create node to iterate on fields.
create_datagrabber(data_path, template_path, ...)	Create node to grab data using DataGrabber in Nipype.